无法在Linux Mint 17上安装R软件包
在Linux Mint 17上运行R 3.1.2,尝试安装常用软件包时得到non-zero exit status
.示例install.packages
的完整输出如下:
Running R 3.1.2 on Linux Mint 17, I get a non-zero exit status
when I try to install popular packages. The full output of an example install.packages
attempt is as follows:
> install.packages("plyr")
Installing package into ‘/home/joe_kendrick/R/x86_64-pc-linux-gnu-library/3.1’
(as ‘lib’ is unspecified)
trying URL 'http://cran.rstudio.com/src/contrib/plyr_1.8.1.tar.gz'
Content type 'application/x-gzip' length 393233 bytes (384 Kb)
opened URL
==================================================
downloaded 384 Kb
* installing *source* package ‘plyr’ ...
** package ‘plyr’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
/bin/bash: g++: command not found
make: *** [RcppExports.o] Error 127
ERROR: compilation failed for package ‘plyr’
* removing ‘/home/joe_kendrick/R/x86_64-pc-linux-gnu-library/3.1/plyr’
The downloaded source packages are in
‘/tmp/RtmpXe52Mz/downloaded_packages’
Warning message:
In install.packages("plyr") :
installation of package ‘plyr’ had non-zero exit status
对于我尝试安装的其他软件包,例如ggplot2
和vegan
,我得到的消息基本上相同,尽管在许多情况下,它在尝试安装依赖项失败时更加冗长.
I get essentially the same message for other packages I attempt to install, eg ggplot2
and vegan
, though in many cases it is more verbose as it tries and fails to install dependencies.
This seems like a somewhat common issue, but others seem to have either outdated software or insufficient memory. I am running the latest stable release of both Mint and R, and I have plenty of RAM and a swap file, so I don't think either of these are causing my issue.
每个错误消息
/bin/bash: g++: command not found
您需要安装C ++编译器.我将从其中之一开始:
you need to install a C++ compiler. I would start with one of these:
sudo apt-get install build-essentials # key tools
或
sudo apt-get install r-base-dev # many development tools for R
或者当然
sudo apt-get install r-cran-rcpp # to not install from source
尽管您获得的Rcpp可能比您需要的Rcpp要老.
though the Rcpp you get may be older than the one you need.
针对基于Debian的系统的用户,有一个列表r-sig-debian
.
There is a list r-sig-debian
for users of Debian-based systems.